61 Revīzijas (c59e589713a8da873be3e90bfcf09201ea645d2d)

Autors SHA1 Ziņojums Datums
  YaqingLiu c59e589713 Update: java Xmx32g pirms 3 gadiem
  YaqingLiu df1c66f195 Update: remove only_pass pirms 3 gadiem
  YaqingLiu e8269dd25f Update: annovar pirms 3 gadiem
  YaqingLiu d7acaa8040 Update: replaceRG pirms 3 gadiem
  YaqingLiu 1819c0a4f6 Update: threads in Pindel pirms 3 gadiem
  YaqingLiu af26391dd8 Fixbug: insert size in Pindel pirms 3 gadiem
  YaqingLiu 3accc366b6 update workflow pirms 3 gadiem
  YaqingLiu d064f8f055 Update: workflow pirms 3 gadiem
  YaqingLiu 4975096286 Alter varscan Xmx16g pirms 3 gadiem
  YaqingLiu 13bc0462c9 Update: samtools dir pirms 3 gadiem
  YaqingLiu f515625972 Fixbug: samtools index pirms 3 gadiem
  YaqingLiu 5e46d8aee0 Fixbug: task's name pirms 3 gadiem
  YaqingLiu cd5f5ba56b Fixbug: pindel task name pirms 3 gadiem
  YaqingLiu a36b68f093 Fixbug: $ in pindel pirms 3 gadiem
  YaqingLiu d2988bab5d Fixbug: cluster: cluster_config pirms 3 gadiem
  YaqingLiu 29053d0d19 Alter: replaceRG output pirms 3 gadiem
  YaqingLiu 7e4d99c1a7 Add: replaceRG pirms 3 gadiem
  YaqingLiu fe311d4483 Fixbug: remove pirms 3 gadiem
  YaqingLiu 212b5c40df Fixbug: TNseq output pirms 3 gadiem
  YaqingLiu fe6512cce0 Fixbug: TNseq output pirms 3 gadiem
  YaqingLiu 71cb524380 Fixbug: TNseq output pirms 3 gadiem
  YaqingLiu b124b6d8d0 Fixbug: TNseq pirms 3 gadiem
  YaqingLiu dbce0e5ce4 Alter: tumor-only pirms 3 gadiem
  YaqingLiu 9a3ce1ee23 Alter: VEP task name pirms 3 gadiem
  YaqingLiu 9e1ac3e469 Alter: BQSR pirms 3 gadiem
  YaqingLiu 7868563c2a Fixbug: ANNOVAR pirms 3 gadiem
  YaqingLiu 607454ab2f Update: add VEP pirms 4 gadiem
  YaqingLiu dbd1da94c2 Update: add PASS filter option pirms 4 gadiem
  YaqingLiu 3a2e5030af Update ANNOVAR.wdl filename pirms 4 gadiem
  YaqingLiu d925a41571 Update: ANNOVAR pirms 4 gadiem
  YaqingLiu fef526105b Add TNseq output pirms 4 gadiem
  YaqingLiu 440fc0d224 Add annovar parameter pirms 4 gadiem
  YaqingLiu a2064698dc Fixbug: output of annovar pirms 4 gadiem
  YaqingLiu 6d4d6abe80 Update: simplify BQSR pirms 4 gadiem
  YaqingLiu e8f07a8c53 Alter: TNseq input is deduped BAM pirms 4 gadiem
  YaqingLiu d1faa18e02 Alter: TNseq Input pirms 4 gadiem
  YaqingLiu 03fb6ee728 Update: defaults pirms 4 gadiem
  YaqingLiu 7e612b6ddd Fix bug: merge Varscan's results pirms 4 gadiem
  YaqingLiu cb6332a576 Update: varscan somatic annovar pirms 4 gadiem
  YaqingLiu a06abfc5cf Update: varscan pirms 4 gadiem
  YaqingLiu 96a3c5dc5d Update: annovar.wdl, remove ensGene and knownGene pirms 4 gadiem
  YaqingLiu 4ce53ad6c6 Fix bug: TNscope.wdl pirms 4 gadiem
  YaqingLiu af9561b1e0 Fix bug: BQSR.wdl pirms 4 gadiem
  YaqingLiu ed468bfd8e Fix bug: TNseq.wdl pirms 4 gadiem
  YaqingLiu a6057601d2 Fix bug: BQSR.wdl pirms 4 gadiem
  YaqingLiu fe662a3686 Fix bug: TNseq.wdl pirms 4 gadiem
  YaqingLiu 09159a19f9 Update: README.md pirms 4 gadiem
  YaqingLiu 693a6bc34b Fix bug: Haplotyper pirms 4 gadiem
  YaqingLiu eb14b9b267 Update: inputs pirms 4 gadiem
  YaqingLiu d73e139d63 Update: inputs pirms 4 gadiem