@@ -12,7 +12,7 @@ task sister { | |||
export LD_LIBRARY_PATH=/opt/htslib-1.9 | |||
mkdir sister | |||
vbt varcomp -called ${LCL5_vcf} -base ${LCL6_vcf} -ref ${ref_dir}/${fasta} -outDir sister -filter none | |||
/opt/VBT-TrioAnalysis/vbt varcomp -called ${LCL5_vcf} -base ${LCL6_vcf} -ref ${ref_dir}/${fasta} -outDir sister -filter none | |||
mv sister/TPBase.vcf ${family_name}.sister.consistent.vcf | |||
mv sister/FP.vcf ${family_name}.LCL5.uniq.vcf |