LUYAO REN
hace 5 años
Se han modificado 1 ficheros con 1 adiciones y 1 borrados
+ 1
- 1
tasks/sister.wdl
Ver fichero
| @@ -12,7 +12,7 @@ task sister { | |||
| export LD_LIBRARY_PATH=/opt/htslib-1.9 | |||
| mkdir sister | |||
| vbt varcomp -called ${LCL5_vcf} -base ${LCL6_vcf} -ref ${ref_dir}/${fasta} -outDir sister -filter none | |||
| /opt/VBT-TrioAnalysis/vbt varcomp -called ${LCL5_vcf} -base ${LCL6_vcf} -ref ${ref_dir}/${fasta} -outDir sister -filter none | |||
| mv sister/TPBase.vcf ${family_name}.sister.consistent.vcf | |||
| mv sister/FP.vcf ${family_name}.LCL5.uniq.vcf | |||
Cargando…