YaqingLiu
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bcftools-merge
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bcftools-merge is used to merge VCF files into a singe VCF.
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YaqingLiu 3ad726fb45 test input 4 vuotta sitten
tasks fix bug 4 vuotta sitten
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README.md test input 4 vuotta sitten
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README.md

Usage

$ open-choppy-env $ choppy install YaqingLiu/bcftools

Input File

Input file should be in the form of json. For example:

{
	"vcf": [
          "oss://choppy-cromwell-result/test-choppy/..._pon.vcf",
          "oss://choppy-cromwell-result/test-choppy/..._pon.vcf",
          "oss://choppy-cromwell-result/test-choppy/..._pon.vcf"
        ],
	"sample_id": "somatic_normal"
}