共有 3 個檔案被更改，包括 3 行新增 和 3 行删除
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- 1
tasks/BQSR.wdl
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| @@ -16,7 +16,7 @@ task BQSR { | |||
| String cluster_config | |||
| String disk_size | |||
| String sample=basename(realigned_bam, ".*") | |||
| String sample=basename(realigned_bam, ".sorted.deduped.realigned.bam") | |||
| command <<< | |||
| set -o pipefail | |||
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tasks/PoN.wdl
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| @@ -12,7 +12,7 @@ task PoN { | |||
| String cluster_config | |||
| String disk_size | |||
| String sample=basename(normal_bam, ".*") | |||
| String sample=basename(normal_bam, ".sorted.deduped.realigned.recaled.bam") | |||
| command <<< | |||
| set -o pipefail | |||
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tasks/Realigner.wdl
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| @@ -14,7 +14,7 @@ task Realigner { | |||
| String cluster_config | |||
| String disk_size | |||
| String sample=basename(deduped_bam, ".*") | |||
| String sample=basename(deduped_bam, ".sorted.deduped.bam") | |||
| command <<< | |||
| set -o pipefail | |||
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