String disk_size | String disk_size | ||||
command <<< | command <<< | ||||
#mkdir -p /cromwell_root/tmp/cnvkit | |||||
# mkdir -p /cromwell_root/tmp/cnvkit | |||||
cp -r ${sep=" " results} . | cp -r ${sep=" " results} . | ||||
#cd /cromwell_root/tmp/cnvkit | |||||
# cd /cromwell_root/tmp/cnvkit | |||||
# this version app just provides seg | # this version app just provides seg | ||||
cnvkit.py export seg *.cns -o ${sample_id}.seg | cnvkit.py export seg *.cns -o ${sample_id}.seg | ||||
>>> | >>> |