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variant-calling
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51 Commity (403df4530ca7150cb3093c2a28101cb72379f22c)

Autor SHA1 Wiadomość Data
  renluyao 403df4530c Update 'workflow.wdl' 3 lat temu
  renluyao ad55a9a349 Update 'workflow.wdl' 3 lat temu
  YaqingLiu f4c1c1aba5 Update: sample_id in Haplotyper and Pindel 3 lat temu
  YaqingLiu df1c66f195 Update: remove only_pass 3 lat temu
  YaqingLiu 3accc366b6 update workflow 3 lat temu
  YaqingLiu f4279ccb13 Update: workflow operator 3 lat temu
  YaqingLiu d064f8f055 Update: workflow 3 lat temu
  YaqingLiu c72f3aae8c Fixbug: replaceRG input 3 lat temu
  YaqingLiu cd5f5ba56b Fixbug: pindel task name 3 lat temu
  YaqingLiu 19a6548af2 Fixbug: add pindel Boolean 3 lat temu
  YaqingLiu 29053d0d19 Alter: replaceRG output 3 lat temu
  YaqingLiu 7e4d99c1a7 Add: replaceRG 3 lat temu
  YaqingLiu 6899365543 Fixbug: defaults 3 lat temu
  YaqingLiu dbce0e5ce4 Alter: tumor-only 3 lat temu
  YaqingLiu 831fa1b007 Alter: varscan_vep input name 3 lat temu
  YaqingLiu 9e1ac3e469 Alter: BQSR 3 lat temu
  YaqingLiu 33b1c80f3e test bam input 3 lat temu
  YaqingLiu cb2cc7173e test add bam 3 lat temu
  YaqingLiu 607454ab2f Update: add VEP 4 lat temu
  YaqingLiu dbd1da94c2 Update: add PASS filter option 4 lat temu
  YaqingLiu d925a41571 Update: ANNOVAR 4 lat temu
  YaqingLiu 440fc0d224 Add annovar parameter 4 lat temu
  YaqingLiu ef82cc2a54 Fixbug: output of annovar 4 lat temu
  YaqingLiu eab87988a1 Alter: Varscan2 input is deduped BAM 4 lat temu
  YaqingLiu e8f07a8c53 Alter: TNseq input is deduped BAM 4 lat temu
  YaqingLiu d1faa18e02 Alter: TNseq Input 4 lat temu
  YaqingLiu cb6332a576 Update: varscan somatic annovar 4 lat temu
  YaqingLiu a06abfc5cf Update: varscan 4 lat temu
  YaqingLiu 4ce53ad6c6 Fix bug: TNscope.wdl 4 lat temu
  YaqingLiu 59b2e9cb84 Fix bug: Realigner's inputs 4 lat temu
  YaqingLiu ed468bfd8e Fix bug: TNseq.wdl 4 lat temu
  YaqingLiu a6057601d2 Fix bug: BQSR.wdl 4 lat temu
  YaqingLiu ab4b741af9 Fix bug: germline 4 lat temu
  YaqingLiu 784f19e2c9 Fix bug: remove vcf2maf 4 lat temu
  YaqingLiu 02f79915c3 Fix bug: remove vcf2maf 4 lat temu
  YaqingLiu 193d7a3bf4 Update: inputs 4 lat temu
  YaqingLiu 979513f14c Update: inputs 4 lat temu
  YaqingLiu 1dd6c6016d Update: inputs 4 lat temu
  YaqingLiu 340692e44a Update: inputs 4 lat temu
  YaqingLiu eb14b9b267 Update: inputs 4 lat temu
  YaqingLiu d73e139d63 Update: inputs 4 lat temu
  YaqingLiu 51f177520c Update: README.md 4 lat temu
  YaqingLiu 24df48e237 Update: TNseq.wdl 4 lat temu
  YaqingLiu 0c11f3af3f Update: TNscope.wdl 4 lat temu
  YaqingLiu 91f18eb183 Remove corealigner and vcf2maf 4 lat temu
  YaqingLiu 5189a041e6 Update: README.md 4 lat temu
  YaqingLiu bc00d0efe5 Update: README.md 4 lat temu
  YaqingLiu 031f11adde Fix Bug: input 4 lat temu
  YaqingLiu 73ec3f4522 alter workflow parameters 4 lat temu
  YaqingLiu 78ecea16ce alter workflow parameters 4 lat temu