Fixbug: defaults

defaults

@@ -40,6 +40,6 @@
   "annovar": false,
   "vep": false,
   "only_pass": true,
-  "input_fastq": true,
+  "input_fastq": false,
   "input_bam": false
 }

workflow.wdl

@@ -435,8 +435,7 @@ workflow {{ project_name }} {
       }
     }
   }
-
-
+  
   if (input_bam) {
     if (tumor_deduped_bam != "") {
       call BQSR.BQSR as tumor_BQSR_fb {