@@ -7,7 +7,7 @@ task mergeNum { | |||
command <<< | |||
set -o pipefail | |||
set -e | |||
for i in ${seq=" " vcfnumber} | |||
for i in ${sep=" " vcfnumber} | |||
do | |||
cat $i | cut -d':' -f2 | tr '\n' '\t' | sed s'/\t$/\n/g' >> vcfstats | |||
done |
@@ -22,7 +22,7 @@ workflow {{ project_name }} { | |||
String fasta | |||
File sdf | |||
scatter (sample in inputSamples){ | |||
scatter (sample in inputSamples) { | |||
call fastqc.fastqc as fastqc { | |||
input: | |||
read1=sample[0], |