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2. DELLY检测突变 |
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2. DELLY检测突变 |
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delly call -g <fastq_file> -o <output_bcf> -x human.hg38.excl.tsv <tumor_bam> <normal_bam> |
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delly filter -f somatic -o <output_filtered_bcf> -s samples.tsv <output_bcf> |
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```bash |
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delly call -g <fastq_file> -o <output_bcf> -x human.hg38.excl.tsv <tumor_bam> <normal_bam> |
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delly filter -f somatic -o <output_filtered_bcf> -s samples.tsv <output_bcf> |
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``` |
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其中samples.tsv按照如下准备,其中的tumor_name和normal_name要与bam文件中一致 |
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其中samples.tsv按照如下准备,其中的tumor_name和normal_name要与bam文件中一致 |
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```bash |
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```bash |