YaqingLiu
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variant-calling
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40 Commits (b124b6d8d03173c1dd7e61d73ff73db8459a4fb3)

Author SHA1 Message Date
  YaqingLiu b124b6d8d0 Fixbug: TNseq 3 years ago
  YaqingLiu dbce0e5ce4 Alter: tumor-only 3 years ago
  YaqingLiu 9a3ce1ee23 Alter: VEP task name 3 years ago
  YaqingLiu 9e1ac3e469 Alter: BQSR 3 years ago
  YaqingLiu 7868563c2a Fixbug: ANNOVAR 3 years ago
  YaqingLiu 607454ab2f Update: add VEP 4 years ago
  YaqingLiu dbd1da94c2 Update: add PASS filter option 4 years ago
  YaqingLiu 3a2e5030af Update ANNOVAR.wdl filename 4 years ago
  YaqingLiu d925a41571 Update: ANNOVAR 4 years ago
  YaqingLiu fef526105b Add TNseq output 4 years ago
  YaqingLiu 440fc0d224 Add annovar parameter 4 years ago
  YaqingLiu a2064698dc Fixbug: output of annovar 4 years ago
  YaqingLiu 6d4d6abe80 Update: simplify BQSR 4 years ago
  YaqingLiu e8f07a8c53 Alter: TNseq input is deduped BAM 4 years ago
  YaqingLiu d1faa18e02 Alter: TNseq Input 4 years ago
  YaqingLiu 03fb6ee728 Update: defaults 4 years ago
  YaqingLiu 7e612b6ddd Fix bug: merge Varscan's results 4 years ago
  YaqingLiu cb6332a576 Update: varscan somatic annovar 4 years ago
  YaqingLiu a06abfc5cf Update: varscan 4 years ago
  YaqingLiu 96a3c5dc5d Update: annovar.wdl, remove ensGene and knownGene 4 years ago
  YaqingLiu 4ce53ad6c6 Fix bug: TNscope.wdl 4 years ago
  YaqingLiu af9561b1e0 Fix bug: BQSR.wdl 4 years ago
  YaqingLiu ed468bfd8e Fix bug: TNseq.wdl 4 years ago
  YaqingLiu a6057601d2 Fix bug: BQSR.wdl 4 years ago
  YaqingLiu fe662a3686 Fix bug: TNseq.wdl 4 years ago
  YaqingLiu 09159a19f9 Update: README.md 4 years ago
  YaqingLiu 693a6bc34b Fix bug: Haplotyper 4 years ago
  YaqingLiu eb14b9b267 Update: inputs 4 years ago
  YaqingLiu d73e139d63 Update: inputs 4 years ago
  YaqingLiu 51f177520c Update: README.md 4 years ago
  YaqingLiu 24df48e237 Update: TNseq.wdl 4 years ago
  YaqingLiu 0c11f3af3f Update: TNscope.wdl 4 years ago
  YaqingLiu 2958e946a7 Update: README.md 4 years ago
  YaqingLiu 91f18eb183 Remove corealigner and vcf2maf 4 years ago
  YaqingLiu 5189a041e6 Update: README.md 4 years ago
  YaqingLiu bc00d0efe5 Update: README.md 4 years ago
  YaqingLiu b76c7f072f Update: deduped_Matrics 4 years ago
  YaqingLiu 031f11adde Fix Bug: input 4 years ago
  YaqingLiu 2cf4efbe99 alter workflow parameters 4 years ago
  YaqingLiu b9b58e0480 first commit 4 years ago