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remove output_id

master
YaqingLiu 3 lat temu
rodzic
commit
212f2d80ff
3 zmienionych plików z 2 dodań i 4 usunięć
  1. +0
    -1
      inputs
  2. +1
    -1
      tasks/fastq_ncm.wdl
  3. +1
    -2
      workflow.wdl

+ 0
- 1
inputs Wyświetl plik

@@ -2,7 +2,6 @@
"{{ project_name }}.sample_id": "{{ sample_id }}",
"{{ project_name }}.fastq1": "{{ fastq1 }}",
"{{ project_name }}.fastq2": "{{ fastq2 }}",
"{{ project_name }}.output_id": "{{ output_id }}",
"{{ project_name }}.subsampling_rate": "{{ subsampling_rate }}",
"{{ project_name }}.docker": "{{ docker }}",
"{{ project_name }}.disk_size": "{{ disk_size }}",

+ 1
- 1
tasks/fastq_ncm.wdl Wyświetl plik

@@ -1,8 +1,8 @@
task fastq_ncm {
String out_id
File fq1
File fq2
String out_id
String subsampling_rate
String docker
String cluster_config

+ 1
- 2
workflow.wdl Wyświetl plik

@@ -6,7 +6,6 @@ workflow {{ project_name }} {
String sample_id
File fastq1
File fastq2
String output_id
String subsampling_rate
String docker
String cluster_config
@@ -14,9 +13,9 @@ workflow {{ project_name }} {
call fastq_ncm.fastq_ncm as fastq_ncm {
input:
out_id=sample_id,
fq1=fastq1,
fq2=fastq2,
out_id=output_id,
subsampling_rate=subsampling_rate,
docker=docker,
disk_size=disk_size,

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