@@ -2,7 +2,6 @@ | |||
"{{ project_name }}.sample_id": "{{ sample_id }}", | |||
"{{ project_name }}.fastq1": "{{ fastq1 }}", | |||
"{{ project_name }}.fastq2": "{{ fastq2 }}", | |||
"{{ project_name }}.output_id": "{{ output_id }}", | |||
"{{ project_name }}.subsampling_rate": "{{ subsampling_rate }}", | |||
"{{ project_name }}.docker": "{{ docker }}", | |||
"{{ project_name }}.disk_size": "{{ disk_size }}", |
@@ -1,8 +1,8 @@ | |||
task fastq_ncm { | |||
String out_id | |||
File fq1 | |||
File fq2 | |||
String out_id | |||
String subsampling_rate | |||
String docker | |||
String cluster_config |
@@ -6,7 +6,6 @@ workflow {{ project_name }} { | |||
String sample_id | |||
File fastq1 | |||
File fastq2 | |||
String output_id | |||
String subsampling_rate | |||
String docker | |||
String cluster_config | |||
@@ -14,9 +13,9 @@ workflow {{ project_name }} { | |||
call fastq_ncm.fastq_ncm as fastq_ncm { | |||
input: | |||
out_id=sample_id, | |||
fq1=fastq1, | |||
fq2=fastq2, | |||
out_id=output_id, | |||
subsampling_rate=subsampling_rate, | |||
docker=docker, | |||
disk_size=disk_size, |