You can not select more than 25 topics
Topics must start with a letter or number, can include dashes ('-') and can be up to 35 characters long.
YaqingLiu
459dc16be2
add parameter: include dup
|
4 年之前 | |
|---|---|---|
| tasks | 4 年之前 | |
| README.md | 5 年之前 | |
| input_bai.tsv | 5 年之前 | |
| input_bam.tsv | 5 年之前 | |
| inputs | 4 年之前 | |
| workflow.wdl | 4 年之前 | |
README.md
Author: Jun Shang
Email: shangjunv@163.com
Last Updates: 20/03/2020
Requirements
- choppy
- Ali-Cloud
$ source activate choppy
$ choppy install junshang/bedtools
$ choppy apps
quick start
- 将 input_bam.tsv 和 input_bai.tsv 放到阿里云，路径用户自己设定
input_bam.tsv 和 input_bai.tsv 格式参考上述示例文件
- 准备 samples.csv 文件，如下：
$ choppy samples junshang/bedtools-latest > samples.csv
$ choppy batch junshang/bedtools-latest samples.csv -p Your_project_name