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YaqingLiu
459dc16be2
add parameter: include dup
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преди 4 години | |
|---|---|---|
| tasks | преди 4 години | |
| README.md | преди 5 години | |
| input_bai.tsv | преди 5 години | |
| input_bam.tsv | преди 5 години | |
| inputs | преди 4 години | |
| workflow.wdl | преди 4 години | |
README.md
Author: Jun Shang
Email: shangjunv@163.com
Last Updates: 20/03/2020
Requirements
- choppy
- Ali-Cloud
$ source activate choppy
$ choppy install junshang/bedtools
$ choppy apps
quick start
- 将 input_bam.tsv 和 input_bai.tsv 放到阿里云，路径用户自己设定
input_bam.tsv 和 input_bai.tsv 格式参考上述示例文件
- 准备 samples.csv 文件，如下：
$ choppy samples junshang/bedtools-latest > samples.csv
$ choppy batch junshang/bedtools-latest samples.csv -p Your_project_name