fix input bug: add .bai

inputs

@@ -1,5 +1,6 @@
 {
     "{{ project_name }}.bam": "{{ bam }}",
+    "{{ project_name }}.bam": "{{ bai }}",
     "{{ project_name }}.bed": "{{ bed }}",
     "{{ project_name }}.sample": "{{ sample }}",
     "{{ project_name }}.docker": "{{ docker }}",

tasks/bamdst.wdl

@@ -1,6 +1,7 @@
 task bamdst {
 
     File bam
+    File bai
     File bed
     String sample
     String docker

workflow.wdl

@@ -3,6 +3,7 @@ import "./tasks/bamdst.wdl" as bamdst
 workflow {{ project_name }} {
     
     File bam
+    File bai
     File bed
     String sample
     String docker
@@ -12,6 +13,7 @@ workflow {{ project_name }} {
     call bamdst.bamdst as bamdst {
         input:
         bam=bam,
+        bai=bai,
         bed=bed,
         sample=sample,
         docker=docker,