command line

tasks/NGScheckMates.wdl

@@ -11,7 +11,7 @@ task NGScheckMates {
 		nt=$(nproc)
 		export NCM_HOME=/opt/NGSCheckMate
 		python /opt/NGSCheckMate/ncm_fastq.py -l ${input_file} -pt /opt/NGSCheckMate/SNP/SNP.pt -O '.' -p $nt -f -nz
-		ls /cromwell_inputs/ > wd.txt
+		tree /cromwell_inputs/ > wd.txt
 	>>>
 
 	runtime {