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LUYAO REN 6 years ago
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      tasks/NGScheckMates.wdl

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tasks/NGScheckMates.wdl View File

@@ -11,7 +11,7 @@ task NGScheckMates {
nt=$(nproc)
export NCM_HOME=/opt/NGSCheckMate
python /opt/NGSCheckMate/ncm_fastq.py -l ${input_file} -pt /opt/NGSCheckMate/SNP/SNP.pt -O '.' -p $nt -f -nz
ls /cromwell_inputs/ > wd.txt
tree /cromwell_inputs/ > wd.txt
>>>

runtime {

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