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tasks/vaf_ncm.wdl
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| @@ -12,7 +12,7 @@ task vaf_ncm { | |||
| export NCM_HOME=/opt/NGSCheckMate | |||
| mkdir -p /ncm/fastq_vaf | |||
| cp vaf /ncm/fastq_vaf | |||
| cp ${vaf} /ncm/fastq_vaf | |||
| python /opt/NGSCheckMate/vaf_ncm.py -f -I /ncm/fastq_vaf/ -O . -nz $nt | |||
| >>> | |||
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