LUYAO REN
6 years ago
1 changed files with 1 additions and 0 deletions
+ 1
- 0
tasks/NGScheckMates.wdl
View File
| @@ -9,6 +9,7 @@ task NGScheckMates { | |||
| set -o pipefail | |||
| set -e | |||
| nt=$(nproc) | |||
| export NCM_HOME=/opt/NGSCheckMate | |||
| python /opt/NGSCheckMate/ncm_fastq.py -l ${input_file} -pt /opt/NGSCheckMate/SNP/SNP.pt -O '.' -p $nt -f -nz | |||
| >>> | |||
Loading…