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[Fix Bug] Cannot find the multiqc command.

tags/v0.1.2
YJC 3 年之前
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c835f2c492
共有 1 個文件被更改,包括 2 次插入1 次删除
  1. +2
    -1
      src/tservice/plugins/merge_rnaseq_expression.clj

+ 2
- 1
src/tservice/plugins/merge_rnaseq_expression.clj 查看文件

@@ -145,7 +145,8 @@
(gen-multiqc-config config)
(doseq [file (fs-api/batch-filter-files multiqc-dir [".*bamqc_qualimap.tar.gz" ".*RNAseq_qualimap.tar.gz"])]
(decompression-tar file))
(let [multiqc-result (mq/multiqc multiqc-dir dest-dir {:title "MultiQC Report" :template "default" :config config})
(let [multiqc-result (mq/multiqc multiqc-dir dest-dir {:title "MultiQC Report" :template "default"
:config config :env {:PATH (add-env-to-path "merge-rnaseq-expression")}})
result {:status (:status multiqc-result)
:msg (:msg multiqc-result)}
log (json/write-str result)]

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