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@@ -145,7 +145,8 @@ |
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(gen-multiqc-config config) |
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(doseq [file (fs-api/batch-filter-files multiqc-dir [".*bamqc_qualimap.tar.gz" ".*RNAseq_qualimap.tar.gz"])] |
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(decompression-tar file)) |
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(let [multiqc-result (mq/multiqc multiqc-dir dest-dir {:title "MultiQC Report" :template "default" :config config}) |
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(let [multiqc-result (mq/multiqc multiqc-dir dest-dir {:title "MultiQC Report" :template "default" |
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:config config :env {:PATH (add-env-to-path "merge-rnaseq-expression")}}) |
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result {:status (:status multiqc-result) |
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:msg (:msg multiqc-result)} |
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log (json/write-str result)] |