소스 검색

Update: README.md

tags/v0.1.2
YaqingLiu 4 년 전
부모
커밋
fbcabf93d5
1개의 변경된 파일3개의 추가작업 그리고 5개의 파일을 삭제
  1. +3
    -5
      README.md

+ 3
- 5
README.md 파일 보기



***Supported callers*** ***Supported callers***


**All callers are not activated by default**, which means the default setting is `false`.
All callers are **not activated by default**, which means the default setting is `false`.

You need to manually set the caller to `true` in the submitted sample.csv. You need to manually set the caller to `true` in the submitted sample.csv.

The fields corresponding to these callers include `haplotyper`, `tnseq`, `tnscope`, `varscan`. The fields corresponding to these callers include `haplotyper`, `tnseq`, `tnscope`, `varscan`.


**Germline** **Germline**
* Haplotyper * Haplotyper


If you only want to call germline variants, please set `haplotyper` to true.

**Somatic** **Somatic**
* TNseq (TNhaplotyper2) * TNseq (TNhaplotyper2)
* TNscope * TNscope
* VarScan * VarScan
* TNhaplotyper (This caller is only available in `v0.1.0` as it is too outdated) * TNhaplotyper (This caller is only available in `v0.1.0` as it is too outdated)


Variant caller can be selected by setting `ture/false` in the submitted sample.csv.

***Accepted data*** ***Accepted data***
* TN matched WES for somatic variant calling * TN matched WES for somatic variant calling
* TN matched WGS for somatic variant calling * TN matched WGS for somatic variant calling

Loading…
취소
저장