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Update: README.md

tags/v0.1.2
YaqingLiu преди 4 години
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### Variant calling
This APP developed for somatic short variant discovery (SNVs + Indels).


***Supported callers***
* TNhaplotyper2
* TNscope
@@ -14,11 +14,11 @@ Variant caller can be selected by setting `ture/false` in the submitted sample.c
The datatype is judged by whether the bed file is set (i.e. the `regions` in inputs).


#### New version
### New version
* The TNhaplotyper, also named as TNseq in `v0.1.0`, has beed substituted by TNhaplotyper2.
* The `corealigner` step has been removed.

#### How to run this APP
### How to run this APP

We recommend using choppy system and Aliyun OSS service. The command will look like this:


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