@@ -459,7 +459,7 @@ workflow {{ project_name }} { | |||
call replaceRG.replaceRG as tumor_replaceRG { | |||
input: | |||
bam=tumor_deduped_bam, | |||
group=group_id + '.T', | |||
group=sample_id + '.T', | |||
sample=sample_id + '.T', | |||
pl=pl, | |||
docker=samtools_docker, | |||
@@ -490,7 +490,7 @@ workflow {{ project_name }} { | |||
call replaceRG.replaceRG as normal_replaceRG { | |||
input: | |||
bam=normal_deduped_bam, | |||
group=group_id + '.N', | |||
group=sample_id + '.N', | |||
sample=sample_id + '.N', | |||
pl=pl, | |||
docker=samtools_docker, |