for i in *vcfstat.txt | for i in *vcfstat.txt | ||||
do | do | ||||
cat $i | sed -n '13,13p' | sed 's/\s\+/\t/g' | cut -f3 >> ${sample_name}.${tag}.ti_tv.txt | |||||
cat $i | sed -n '10,10p' | sed 's/\s\+/\t/g' | cut -f3 >> ${sample_name}.${tag}.ti_tv.txt | |||||
done | done | ||||
for i in *vcfstat.txt | for i in *vcfstat.txt | ||||
do | do | ||||
cat $i | sed -n '14,14p' | sed 's/\s\+/\t/g' | cut -f5 >> ${sample_name}.${tag}.het_hom.txt | |||||
cat $i | sed -n '11,11p' | sed 's/\s\+/\t/g' | cut -f5 >> ${sample_name}.${tag}.het_hom.txt | |||||
done | done | ||||