@@ -14,7 +14,7 @@ task strelka { | |||
set -o pipefail | |||
set -e | |||
nt=$(nproc) | |||
configureStrelkaGermlineWorkflow.py --bam ${Dedup_bam} --referenceFasta ${ref_dir}/${fasta} | |||
/strelka-2.9.10.centos6_x86_64/bin/configureStrelkaGermlineWorkflow.py --bam ${Dedup_bam} --referenceFasta ${ref_dir}/${fasta} | |||
StrelkaGermlineWorkflow/runWorkflow.py -m local -j $nt | |||
>>> | |||