LUYAO REN
6 years ago
1 changed files with 1 additions and 1 deletions
+ 1
- 1
tasks/strelka.wdl
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| set -o pipefail | set -o pipefail | ||||
| set -e | set -e | ||||
| nt=$(nproc) | nt=$(nproc) | ||||
| configureStrelkaGermlineWorkflow.py --bam ${Dedup_bam} --referenceFasta ${ref_dir}/${fasta} | |||||
| /strelka-2.9.10.centos6_x86_64/bin/configureStrelkaGermlineWorkflow.py --bam ${Dedup_bam} --referenceFasta ${ref_dir}/${fasta} | |||||
| StrelkaGermlineWorkflow/runWorkflow.py -m local -j $nt | StrelkaGermlineWorkflow/runWorkflow.py -m local -j $nt | ||||
| >>> | >>> | ||||
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