LUYAO REN
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Se han modificado 2 ficheros con 2 adiciones y 2 borrados
+ 1
- 1
inputs
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| @@ -3,5 +3,5 @@ | |||
| "{{ project_name }}.input_file": "{{ input_file }}", | |||
| "{{ project_name }}.fastq_dir": "{{ fastq_dir }}", | |||
| "{{ project_name }}.disk_size": "100", | |||
| "{{ project_name }}.cluster_config": "OnDemand ecs.sn1ne.4xlarge img-ubuntu-vpc" | |||
| "{{ project_name }}.cluster_config": "OnDemand bcs.es.c.8xlarge img-ubuntu-vpc" | |||
| } | |||
+ 1
- 1
tasks/NGScheckMates.wdl
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| @@ -10,7 +10,7 @@ task NGScheckMates { | |||
| set -e | |||
| nt=$(nproc) | |||
| export NCM_HOME=/opt/NGSCheckMate | |||
| python /opt/NGSCheckMate/ncm_fastq.py -l ${input_file} -pt /opt/NGSCheckMate/SNP/SNP.pt -O '.' -p $nt | |||
| python /opt/NGSCheckMate/ncm_fastq.py -l ${input_file} -pt /opt/NGSCheckMate/SNP/SNP.pt -O '.' -p $nt -s 0.5 | |||
| >>> | |||
| runtime { | |||
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