@@ -174,8 +174,8 @@ call TNscope.sentieon_TNscope as sentieon_TNscope{ | |||
normal_bam_bai = Sentieon_BQSR_normal.recaled_bam_index, | |||
tumor_name = sample_id+'_T', | |||
normal_name = sample_id+'_N', | |||
tumor_recall_data = Sentieon_BQSR_normal.recaled_bam, | |||
normal_recall_data = Sentieon_BQSR_normal.recaled_bam_index, | |||
tumor_recall_data = Sentieon_BQSR_tumor.recal_table, | |||
normal_recall_data = Sentieon_BQSR_normal.recal_table, | |||
ref_dir = ref_fasta_dir, | |||
ref_fasta = ref_fasta, |