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tasks/BQSR.wdl
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| @@ -31,7 +31,6 @@ task Sentieon_BQSR{ | |||
| sentieon driver -t $nt \ | |||
| -r ${ref_dir}/${ref_fasta} -i ${deduped_bam} \ | |||
| $INTERVAL \ | |||
| --algo QualCal \ | |||
| -k ${dbsnp_dir}/${dbsnp} -k ${dbmills_dir}/${db_mills} \ | |||
| ${sample_id}_recal_data.table | |||
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