@@ -134,8 +134,8 @@ if (tumor_in1 != ""){ | |||
ref_fasta=ref_fasta, | |||
dbsnp=dbsnp, | |||
db_mills=db_mills, | |||
deduped_bam=SentieonFastqToBam_normal.deduped_bam, | |||
deduped_bam_index=SentieonFastqToBam_normal.deduped_bam_bai, | |||
deduped_bam=SentieonFastqToBam_tumor.deduped_bam, | |||
deduped_bam_index=SentieonFastqToBam_tumor.deduped_bam_bai, | |||
docker=docker_sentieon, | |||
cluster_config=cluster_config, | |||
disk_size=disk_size, |