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workflow.wdl
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| @@ -134,8 +134,8 @@ if (tumor_in1 != ""){ | |||
| ref_fasta=ref_fasta, | |||
| dbsnp=dbsnp, | |||
| db_mills=db_mills, | |||
| deduped_bam=SentieonFastqToBam_normal.deduped_bam, | |||
| deduped_bam_index=SentieonFastqToBam_normal.deduped_bam_bai, | |||
| deduped_bam=SentieonFastqToBam_tumor.deduped_bam, | |||
| deduped_bam_index=SentieonFastqToBam_tumor.deduped_bam_bai, | |||
| docker=docker_sentieon, | |||
| cluster_config=cluster_config, | |||
| disk_size=disk_size, | |||
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