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更新 'workflow.wdl'

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meng 2 years ago
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d999a183eb
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workflow.wdl View File

String docker_bcftools String docker_bcftools
String docker_annovar String docker_annovar
String docker_tmb String docker_tmb
String docker_tmb_MSIsensor
String docker_MSIsensor


#config #config
String cluster_config String cluster_config
tumor_bam=Sentieon_BQSR_tumor.recaled_bam, tumor_bam=Sentieon_BQSR_tumor.recaled_bam,
tumor_bam_index=Sentieon_BQSR_tumor.recaled_bam_index, tumor_bam_index=Sentieon_BQSR_tumor.recaled_bam_index,
baseline=baseline, baseline=baseline,
docker=docker_msisensor,
docker=docker_MSIsensor,
cluster_config=cluster_config, cluster_config=cluster_config,
disk_size=disk_size disk_size=disk_size
} }

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