@@ -45,7 +45,7 @@ workflow {{ project_name }} { | |||
String docker_bcftools | |||
String docker_annovar | |||
String docker_tmb | |||
String docker_tmb_MSIsensor | |||
String docker_MSIsensor | |||
#config | |||
String cluster_config | |||
@@ -108,7 +108,7 @@ call MSIsensor.MSIsensor as MSIsensor { | |||
tumor_bam=Sentieon_BQSR_tumor.recaled_bam, | |||
tumor_bam_index=Sentieon_BQSR_tumor.recaled_bam_index, | |||
baseline=baseline, | |||
docker=docker_msisensor, | |||
docker=docker_MSIsensor, | |||
cluster_config=cluster_config, | |||
disk_size=disk_size | |||
} |