se_2149

tasks/fastp.wdl

@@ -1,6 +1,6 @@
 task fastp {
     File read
-    String sample_id=sub(basename(read1), "\\.(fastq|fq)\\.gz$", "")
+    String sample_id=sub(basename(read), "\\.(fastq|fq)\\.gz$", "")
     String adapter_sequence
     String adapter_sequence_r2
     String docker