@@ -27,7 +27,6 @@ task batch { | |||
# must exist parameters | |||
cp ${fasta} /cromwell_root/tmp/cnvkit/hg_ref.fa | |||
cp ${faidx} /cromwell_root/tmp/cnvkit/hg_ref.fai | |||
cp ${bed} /cromwell_root/tmp/cnvkit/target.bed | |||
cp ${access_bed} /cromwell_root/tmp/cnvkit/access-mappable.bed | |||
# optional parameters |