@@ -24,7 +24,6 @@ command <<< | |||
output { | |||
File bedGraph = "${sample}_R1_val_1_bismark_bt2_pe.bedGraph.gz" | |||
File cov = "${sample}_R1_val_1_bismark_bt2_pe.bismark.cov.gz" | |||
File M-bias = "${sample}_R1_val_1_bismark_bt2_pe.M-bias.txt" | |||
File splitting_report = "${sample}_R1_val_1_bismark_bt2_pe_splitting_report.txt" | |||
File CHG_context = "CHG_context_{sample}_R1_val_1_bismark_bt2_pe.txt" | |||
File CHH_context = "CHH_context_{sample}_R1_val_1_bismark_bt2_pe.txt" |