linzipeng
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tasks/Call_meth.wdl
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| @@ -24,7 +24,6 @@ command <<< | |||
| output { | |||
| File bedGraph = "${sample}_R1_val_1_bismark_bt2_pe.bedGraph.gz" | |||
| File cov = "${sample}_R1_val_1_bismark_bt2_pe.bismark.cov.gz" | |||
| File M-bias = "${sample}_R1_val_1_bismark_bt2_pe.M-bias.txt" | |||
| File splitting_report = "${sample}_R1_val_1_bismark_bt2_pe_splitting_report.txt" | |||
| File CHG_context = "CHG_context_{sample}_R1_val_1_bismark_bt2_pe.txt" | |||
| File CHH_context = "CHH_context_{sample}_R1_val_1_bismark_bt2_pe.txt" | |||
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