@@ -19,22 +19,12 @@ workflow {{ project_name }} { | |||
File ref_dir | |||
call Trim.Trim as Trim { | |||
input: | |||
sample=sample, | |||
fastq_1=fastq_1, | |||
fastq_2=fastq_2, | |||
docker=docker, | |||
disk_size=disk_size, | |||
cluster_config=cluster_config | |||
} | |||
call Mapping.Mapping as Mapping { | |||
input: | |||
sample=sample, | |||
ref_dir=ref_dir, | |||
trim_read1=Trim.trim_read1, | |||
trim_read2=Trim.trim_read2, | |||
trim_read1=fastq_1, | |||
trim_read2=fastq_2, | |||
docker=docker, | |||
disk_size=disk_size, | |||
cluster_config=cluster_config |