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revise readme

master
stead99 5 lat temu
rodzic
commit
7bf454a0de
2 zmienionych plików z 2 dodań i 5 usunięć
  1. +1
    -2
      tasks/cat_rename.wdl
  2. +1
    -3
      workflow.wdl

+ 1
- 2
tasks/cat_rename.wdl Wyświetl plik

@@ -1,8 +1,8 @@
task cat_rename {
File raw_name
String new_name
String cluster_config
String disk_size
String docker

command <<<
cat ${raw_name}/clean/*_1.fq.gz > ${new_name}_1.fq.gz
@@ -11,7 +11,6 @@ task cat_rename {

runtime {
docker:docker
cluster:cluster_config
systemDisk:"cloud_ssd 40"
dataDisk:"cloud_ssd " + disk_size + " /cromwell_root/"
}

+ 1
- 3
workflow.wdl Wyświetl plik

@@ -2,7 +2,6 @@ import "./tasks/cat_rename.wdl" as cat_rename

workflow {{ project_name }} {
String docker
String cluster_config
String disk_size
File raw_name
String new_name
@@ -12,7 +11,6 @@ workflow {{ project_name }} {
raw_name=raw_name,
new_name=new_name,
docker=docker,
disk_size=disk_size,
cluster_config=cluster_config
disk_size=disk_size
}
}

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