更新 'tasks/rmats.wdl'

tasks/rmats.wdl

@@ -1,11 +1,7 @@
 task rmats {
     String sample_id
-    File b1_1
-    File b1_2
-    File b1_3
-    File b2_1
-    File b2_2
-    File b2_3
+    File b1_txt
+    File b2_txt
     File reference_gtf_file
     
 
@@ -21,8 +17,8 @@ task rmats {
 
         mkdir -p ${sample_id}/output
         mkdir -p ${sample_id}/tmp_output
-        python /usr/local/bin/rmats.py --b1 ${b1_1},${b1_2},${b1_3} \
-            --b2 ${b2_1},${b2_2},${b2_3}\
+        python /usr/local/bin/rmats.py --b1 ${b1_txt} \
+            --b2 ${b2_txt} \
             --gtf ${reference_gtf_file} \
             -t paired \
             --readLength 150 \