更新 'tasks/rmats.wdl'

tasks/rmats.wdl

@@ -24,6 +24,8 @@ task rmats {
             --nthread 4 \
             --od ${sample_id}/output \
             --tmp ${sample_id}/tmp_output
+                  
+        find . -depth > fileList.txt
     >>>
 
     runtime {
@@ -34,6 +36,7 @@ task rmats {
     }
 
     output {
+         File fileList = "fileList.txt"
         Array[File] AS_txt = glob("${sample_id}/output/*.txt")
         Array[File] tmp = glob("${sample_id}/output/tmp/*")
     }