更新 'tasks/spladder.wdl'

tasks/spladder.wdl

@@ -17,7 +17,12 @@ task spladder {
         set -e
 
         mkdir -p ${sample_id}/spladder_out
-        echo ${bam} > bam.txt
+                  
+        for i in ${sep=" " bam}
+		do
+        echo $i >> bam.txt
+		done                  
+
         sed ':a ; N;s/\n/,/ ; t a ; ' bam.txt > alignment.txt
         
         for i in ${sep=" " pickle}