更新 'tasks/spladder.wdl'

tasks/spladder.wdl

@@ -17,8 +17,8 @@ task spladder {
         set -e
 
         mkdir -p ${sample_id}/spladder_out
-
-        sed ':a ; N;s/\n/,/ ; t a ; ' ${bam} > alignment.txt
+        echo ${bam} > bam.txt
+        sed ':a ; N;s/\n/,/ ; t a ; ' bam.txt > alignment.txt
         
         for i in ${sep=" " pickle}
 		do