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更新 'tasks/battenberg.wdl'

/opt/conda/envs/samtools/bin/samtools
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biochenglinliu 1 年之前
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共有 1 個文件被更改,包括 1 次插入1 次删除
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      tasks/battenberg.wdl

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@@ -15,7 +15,7 @@ task battenberg {
cp ${normal_bam} ./${normal_id}.bam
cp ${tumor_bam} ./${sample_id}.bam

/opt/conda/envs/batternberg/bin/samtools view -h -@ 16 -o ${normal_id}.sorted.deduped.sam ./${normal_id}.bam
/opt/conda/envs/samtools/bin/samtools view -h -@ 16 -o ${normal_id}.sorted.deduped.sam ./${normal_id}.bam

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