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Fixbug: output of annovar

tags/v0.1.3
YaqingLiu pirms 4 gadiem
vecāks
revīzija
a2064698dc
1 mainītis faili ar 2 papildinājumiem un 3 dzēšanām
  1. +2
    -3
      tasks/annovar.wdl

+ 2
- 3
tasks/annovar.wdl Parādīt failu

task annovar { task annovar {


String sample
File vcf File vcf
String annotated_vcf = basename(vcf,".vcf") String annotated_vcf = basename(vcf,".vcf")
String hg String hg


output { output {
File avinput = "${annotated_vcf}.avinput" File avinput = "${annotated_vcf}.avinput"
File multianno_txt = "${annotated_vcf}.multianno.txt"
File multianno = "${annotated_vcf}.multianno.vcf"
File multianno_txt = "${annotated_vcf}.${hg}_multianno.txt"
File multianno = "${annotated_vcf}.${hg}_multianno.vcf"
} }
} }

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