1 changed files with 3 additions and 1 deletions
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tasks/index.wdl
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| String clean_bam_name = basename(bam) | String clean_bam_name = basename(bam) | ||||
| command <<< | command <<< | ||||
| samtools index ${bam} | |||||
| samtools index --help | |||||
| print ${clean_bam_name} | |||||
| samtools index ${bam} ${clean_bam_name}.bai | |||||
| >>> | >>> | ||||
| runtime { | runtime { |
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