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@@ -1,5 +1,5 @@ |
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{ |
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"benchmarking_dir": "oss://pgx-result/renluyao/manuscript_v3.0/reference_datasets_v202103/", |
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"benchmarking_dir": "oss://hcc1395/reference_genome/reference_datasets_v202103/", |
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"fasta": "GRCh38.d1.vd1.fa", |
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"BENCHMARKdocker": "registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/rtg-hap:latest", |
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"dbsnp_dir": "oss://hcc1395/reference_genome/GRCh38.d1.vd1/", |
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@@ -13,7 +13,7 @@ |
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"BIGcluster_config": "OnDemand bcs.a2.7xlarge img-ubuntu-vpc", |
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"fastq_screen_conf": "oss://hcc1395/reference_genome/fastq_screen_reference/fastq_screen.conf", |
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"vcf_D5": "", |
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"benchmark_region": "oss://pgx-result/renluyao/manuscript_v3.0/reference_datasets_v202103/Quartet.high.confidence.region.v202103.bed", |
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"benchmark_region": "oss://hcc1395/reference_genome/reference_datasets_v202103/Quartet.high.confidence.region.v202103.bed", |
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"db_mills": "Mills_and_1000G_gold_standard.indels.hg38.vcf", |
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"dbsnp": "dbsnp_146.hg38.vcf", |
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"MENDELIANdocker": "registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/vbt:v1.1", |