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fix: benchmark dir

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YaqingLiu hace 1 año
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{ {
"benchmarking_dir": "oss://pgx-result/renluyao/manuscript_v3.0/reference_datasets_v202103/",
"benchmarking_dir": "oss://hcc1395/reference_genome/reference_datasets_v202103/",
"fasta": "GRCh38.d1.vd1.fa", "fasta": "GRCh38.d1.vd1.fa",
"BENCHMARKdocker": "registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/rtg-hap:latest", "BENCHMARKdocker": "registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/rtg-hap:latest",
"dbsnp_dir": "oss://hcc1395/reference_genome/GRCh38.d1.vd1/", "dbsnp_dir": "oss://hcc1395/reference_genome/GRCh38.d1.vd1/",
"BIGcluster_config": "OnDemand bcs.a2.7xlarge img-ubuntu-vpc", "BIGcluster_config": "OnDemand bcs.a2.7xlarge img-ubuntu-vpc",
"fastq_screen_conf": "oss://hcc1395/reference_genome/fastq_screen_reference/fastq_screen.conf", "fastq_screen_conf": "oss://hcc1395/reference_genome/fastq_screen_reference/fastq_screen.conf",
"vcf_D5": "", "vcf_D5": "",
"benchmark_region": "oss://pgx-result/renluyao/manuscript_v3.0/reference_datasets_v202103/Quartet.high.confidence.region.v202103.bed",
"benchmark_region": "oss://hcc1395/reference_genome/reference_datasets_v202103/Quartet.high.confidence.region.v202103.bed",
"db_mills": "Mills_and_1000G_gold_standard.indels.hg38.vcf", "db_mills": "Mills_and_1000G_gold_standard.indels.hg38.vcf",
"dbsnp": "dbsnp_146.hg38.vcf", "dbsnp": "dbsnp_146.hg38.vcf",
"MENDELIANdocker": "registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/vbt:v1.1", "MENDELIANdocker": "registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/vbt:v1.1",

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